Documentation Index
Fetch the complete documentation index at: https://panopticon-cli.com/llms.txt
Use this file to discover all available pages before exploring further.
Project Setup Wizard
The setup wizard (pan setup) interactively guides you through complete project configuration, replacing the minimal pan project add with a comprehensive setup flow.
Running the Wizard
The wizard asks questions, detects project structure, applies templates, and optionally spawns a Setup Agent for AI-assisted configuration.
Setup Flow
Step 1: Project Location
$ pan setup
Welcome to Panopticon Project Setup!
Step 1: Project Location
Where is your project? [/home/user/Projects/MyProject]: _
Scanning directory structure...
Step 2: Project Type Detection
The wizard scans your project directory and detects the structure:
Step 2: Project Type Detection
Found: 31 git repositories in subdirectories
Detected: Polyrepo (multiple independent git repos)
Is this correct? [Y/n]: _
Step 3: Template Selection
Based on your project structure, the wizard recommends a template:
Step 3: Template Selection
Based on your project structure, recommended template:
→ progressive-polyrepo (30+ repos, team meta repo, progressive workspaces)
Available templates:
1. simple-app — Single repo, standard branching
2. monorepo — One repo, multiple packages/services
3. polyrepo — 2-10 repos, all checked out per workspace
4. progressive-polyrepo — 10+ repos, on-demand checkout
5. custom — Start from scratch
Select template [4]: _
Step 4: Repository Configuration
Step 4: Repository Configuration
Scanning 31 repos for branch information...
Default branch detected:
- 17 repos use 'master'
- 14 repos use 'main'
PR target branch:
What branch should PRs target? [main]: qa
Would you like to organize repos into groups? [Y/n]: _
Step 5: Issue Tracker
Step 5: Issue Tracker
Which issue tracker does this project use?
1. Linear
2. GitHub Issues
3. Rally
4. GitLab Issues
5. None / Manual
Select [3]: _
Rally artifact types to track [F,US,DE,TA]: _
Rally project name: _
Step 6: Meta Repo
Progressive polyrepo projects use a meta repo for shared skills,
architecture docs, and team conventions.
Create a new meta repo? [Y/n]: _
Meta repo name [team-meta]: _
Would you like the Setup Agent to analyze your codebase and
generate initial docs? [Y/n]: _
[Spawning Setup Agent...]
Step 7: Review & Save
Step 7: Review & Save
Here's your configuration:
[YAML preview]
Save to ~/.panopticon/projects.yaml? [Y/n]: _
Done! Next steps:
- Run 'pan workspace create F29698' to test workspace creation
- Review generated docs in team-meta/
- Share team-meta/ with your team for onboarding
Project Templates
Templates are pre-built configurations for common project archetypes. They live in Panopticon’s source and are applied during setup.
Template Structure
templates/project-types/
├── simple-app/
│ ├── template.yaml # Template metadata + defaults
│ └── agent-template/ # .claude/ skeleton
│ └── .claude/
│ ├── CLAUDE.md
│ └── skills/
├── monorepo/
├── polyrepo/
└── progressive-polyrepo/
├── template.yaml
├── agent-template/
└── meta-repo-scaffold/ # Skeleton for the meta repo
# template.yaml
name: progressive-polyrepo
description: Large-scale polyrepo with 10+ repos and progressive workspace creation
recommended_when:
min_repos: 10
has_meta_repo: true
defaults:
workspace:
type: polyrepo
progressive: true
workspaces_dir: workspaces
specialists:
merge: false
prompts:
- key: pr_target
question: "What branch should PRs target?"
default: main
type: string
- key: create_meta
question: "Create a meta repo for shared skills and docs?"
default: true
type: boolean
- key: meta_name
question: "Meta repo name?"
default: "team-meta"
type: string
condition: create_meta == true
Setup Agent
The Setup Agent is an AI agent that explores your codebase to detect conventions and generate configuration files. It’s spawned optionally by the wizard for AI-assisted setup.
What the Setup Agent Does
- Explores the codebase — Reads READMEs, package.json files, CI configs, Terraform files
- Detects conventions — Branch naming patterns, PR conventions, code style, test frameworks
- Generates CLAUDE.md — Writes project-specific AI instructions for only non-obvious conventions
- Generates repo-map.md — Documents each repo’s purpose, dependencies, and relationships
- Generates repo-groups.yaml — Suggests logical groupings based on naming patterns
- Generates onboarding checklist — Lists prerequisites, API keys, access requirements
team-meta/
├── .agent-template/ # Copied into every workspace
│ └── .claude/
│ ├── CLAUDE.md # Project conventions for agents
│ └── skills/
├── panopticon/ # Panopticon-specific config
│ └── repo-groups.yaml # Repo group definitions
├── docs/
│ ├── repo-map.md # What each repo does
│ ├── architecture.md # System architecture
│ └── onboarding/
│ ├── checklist.md # Prerequisites checklist
│ ├── machine-setup.sh # Automated setup script
│ └── README.md
└── README.md
Spawning the Setup Agent
The Setup Agent runs in a tmux session, similar to planning agents:
# Setup Agent prompt includes:
- Project context (name, path, type, repo count, tracker)
- Detected repositories table
- Tasks: Generate CLAUDE.md, repo-map.md, repo-groups.yaml, onboarding checklist
- Output location: {{META_REPO_PATH}}/
Template Selection Guide
| Template | When to Use | Min Repos |
|---|
simple-app | Single repo, standard branching | 1 |
monorepo | One repo, multiple packages/services | 1 |
polyrepo | 2-9 repos, all checked out per workspace | 2 |
progressive-polyrepo | 10+ repos, on-demand checkout | 10 |
Deprecating pan project add
The old pan project add command is deprecated in favor of pan setup. It only did basic detection (monorepo vs polyrepo, Linear team prefix) and wrote minimal config. pan setup provides:
- Comprehensive configuration (workspaces, services, quality gates)
- Template-based defaults
- AI-assisted convention detection
- Meta repo scaffolding